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All theses

Target thesis · Transcription factor

MYC

Myc proto-oncogene protein

Generated 2026-07-12 · KG version 84 · every number traces to the evidence appendix

Coverage note

read this firstCoverage confidence: High

High coverage — assessed with confidence across dimensions.

DimensionHoldingTier
Literature253 curated papers (PubMed ~39,203 oncology)High
Patents100 patents, 180 organizationsHigh
Compounds90 distinct compounds (ChEMBL 176; edge-ratio 0.51)High
Genetic (DepMap)present — near-pan-essential dependencyHigh
Structuralpresent (Foldseek/AlphaFold + AlphaMissense)High

Coverage honesties, up front

  • Modality is uninformative — 100% of the 90 compounds are unclassified, so the chemical strategies being tried cannot be characterised.
  • The entity filter rejected 3 parse-fragments (MYC PROTO- ×2, PHD FINGER) before synthesis.

Assessed with confidence

  • Genetic validation
  • Druggability gap
  • Competitive momentum

Flagged / withheld

  • Modality (100% unclassified)
  • Entity filter rejected 3 parse-fragments

Target-level readiness: Thesis-ready.

Headline verdict

No strong angle· matches its reputation

The most-validated, least-druggable target in this set — and the gap is the thesis. MYC is near-pan-essential (DepMap dependency 95.2%, mean -1.99) and patent interest is surging (51 filings in 2025), yet not one of its 90 compounds has reached even phase 1 (max clinical phase 0). The biology could not be more validated; the chemistry has no clinical proof point. There is no strong non-consensus angle — MYC's profile is exactly its reputation: essential, pursued, and undrugged.

The bull case

  1. 1.

    Overwhelming genetic dependency. DepMap mean gene effect -1.9871, essential in 95.2% of 1,208 models — among the strongest dependencies in the entire corpus.

    confidence: highgenetic_validation

  2. 2.

    Surging, broad commercial interest. 100 patents across 180 organizations, with filing velocity 17 (2023) → 22 (2024) → 51 (2025); emerging_signals flags a patent surge. The field is intensifying its attack.

    confidence: highcompetitive_landscape / emerging_signals

  3. 3.

    Pathogenic footprint and deep literature. 43.5% of 8,341 variants pathogenic (hotspot residue 363); 253 curated papers.

    confidence: highgenetic_validation.variant_pathogenicity

The bear case

  1. 1.

    Structurally undruggable — the defining fact. Despite 90 compounds and a 2025 patent surge, max clinical phase = 0: nothing has reached phase 1. MYC is a transcription factor with no enzymatic pocket; direct inhibition has, in this graph, zero clinical proof points.

    confidence: highcompetitive_landscape.compound_phase_distribution

  2. 2.

    Pan-essentiality = narrow window. The same 95.2% dependency that validates MYC means it is essential in normal proliferating tissue — the CHEK1 problem again: validation and therapeutic window are in tension.

    confidence: highgenetic_validation, interpreted

  3. 3.

    Momentum into an undrugged target is a caution. 51 filings in 2025 against a target with no phase-1 asset reads as crowding/hope, not de-risking.

    confidence: moderatecompetitive_landscape / emerging_signals

  4. 4.

    No modality read. 100% of compounds unclassified — the graph cannot characterise the chemical strategies being tried.

    confidence: flaggedkg_native.modality_gaps

The non-consensus angleNo strong angle

No strong non-consensus signal in current data; MYC's profile matches its reputation. No DepMap co-essentiality fired and there is no independently multi-sourced whitespace node.

  • The transcriptional machinery, but PPI-proxy only. The functional-coupling whitespace tool returns EP300, TRRAP, KAT2A, ZBTB17 (MIZ-1), BIN1, HIF1A (PPI 0.99+) — MYC's coactivator/cofactor apparatus. Of these, only HIF1A is in Mosaic's curated target set; it carries 0 patents and 0 compounds *in Mosaic's KG*, against 73 tracked papers — a statement about this KG's patent coverage for HIF1A, not about the real-world landscape, where the HIF pathway is actively pursued. EP300, TRRAP, KAT2A, ZBTB17 and BIN1 are outside curated coverage, so their patent/compound status is not assessed (not a whitespace claim). This hints at the 'drug the machinery, not MYC itself' strategy, but it is PPI-proxy, not co-essentiality, so it is not advanced.

    confidence: PPI-proxy — weakkg_native.synthetic_lethal_whitespace (PPI-proxy)

    Patent / compound status: not assessed (out of coverage). gene outside Mosaic curated coverage (HIF1A excepted — in-set, 0 in this KG, which is a coverage statement not a landscape claim) — competitive landscape is a validated lead to verify externally, not a whitespace claim.

  • Resistance/partner co-mentions are thin and consensus. MCL1 (2 papers; 156 patents), CHEK2/BRAF/KRAS (1 paper each) — co-mentions, heavily patented, not whitespace.

    confidence: body/mentionkg_native.resistance_bypass_map (curated)

Honest empties

  • No co-essentiality fired.
  • Modality uninformative.
  • The emerging_signals patent surge is reported as a bear-side momentum caution, not a non-consensus finding.

What would change this thesis

  • If any MYC-directed compound reaches phase 1, the central bear (structural undruggability) cracks and the validation finally has a chemistry on-ramp.
  • If DepMap co-essentiality resolves a synthetic-lethal partner of MYC, the 'drug the machinery' angle upgrades from PPI-proxy to validated.
  • If a tumor-selective MYC-dependency context is evidenced, the pan-essentiality/window bear weakens.