Target thesis · Transcription factor
MYC
Myc proto-oncogene protein
Generated 2026-07-12 · KG version 84 · every number traces to the evidence appendix
Coverage note
read this firstCoverage confidence: HighHigh coverage — assessed with confidence across dimensions.
| Dimension | Holding | Tier |
|---|---|---|
| Literature | 253 curated papers (PubMed ~39,203 oncology) | High |
| Patents | 100 patents, 180 organizations | High |
| Compounds | 90 distinct compounds (ChEMBL 176; edge-ratio 0.51) | High |
| Genetic (DepMap) | present — near-pan-essential dependency | High |
| Structural | present (Foldseek/AlphaFold + AlphaMissense) | High |
Coverage honesties, up front
- Modality is uninformative — 100% of the 90 compounds are unclassified, so the chemical strategies being tried cannot be characterised.
- The entity filter rejected 3 parse-fragments (MYC PROTO- ×2, PHD FINGER) before synthesis.
Assessed with confidence
- Genetic validation
- Druggability gap
- Competitive momentum
Flagged / withheld
- Modality (100% unclassified)
- Entity filter rejected 3 parse-fragments
Target-level readiness: Thesis-ready.
Headline verdict
No strong angle· matches its reputationThe most-validated, least-druggable target in this set — and the gap is the thesis. MYC is near-pan-essential (DepMap dependency 95.2%, mean -1.99) and patent interest is surging (51 filings in 2025), yet not one of its 90 compounds has reached even phase 1 (max clinical phase 0). The biology could not be more validated; the chemistry has no clinical proof point. There is no strong non-consensus angle — MYC's profile is exactly its reputation: essential, pursued, and undrugged.
The bull case
- 1.
Overwhelming genetic dependency. DepMap mean gene effect -1.9871, essential in 95.2% of 1,208 models — among the strongest dependencies in the entire corpus.
confidence: highgenetic_validation
- 2.
Surging, broad commercial interest. 100 patents across 180 organizations, with filing velocity 17 (2023) → 22 (2024) → 51 (2025); emerging_signals flags a patent surge. The field is intensifying its attack.
confidence: highcompetitive_landscape / emerging_signals
- 3.
Pathogenic footprint and deep literature. 43.5% of 8,341 variants pathogenic (hotspot residue 363); 253 curated papers.
confidence: highgenetic_validation.variant_pathogenicity
The bear case
- 1.
Structurally undruggable — the defining fact. Despite 90 compounds and a 2025 patent surge, max clinical phase = 0: nothing has reached phase 1. MYC is a transcription factor with no enzymatic pocket; direct inhibition has, in this graph, zero clinical proof points.
confidence: highcompetitive_landscape.compound_phase_distribution
- 2.
Pan-essentiality = narrow window. The same 95.2% dependency that validates MYC means it is essential in normal proliferating tissue — the CHEK1 problem again: validation and therapeutic window are in tension.
confidence: highgenetic_validation, interpreted
- 3.
Momentum into an undrugged target is a caution. 51 filings in 2025 against a target with no phase-1 asset reads as crowding/hope, not de-risking.
confidence: moderatecompetitive_landscape / emerging_signals
- 4.
No modality read. 100% of compounds unclassified — the graph cannot characterise the chemical strategies being tried.
confidence: flaggedkg_native.modality_gaps
The non-consensus angleNo strong angle
No strong non-consensus signal in current data; MYC's profile matches its reputation. No DepMap co-essentiality fired and there is no independently multi-sourced whitespace node.
The transcriptional machinery, but PPI-proxy only. The functional-coupling whitespace tool returns EP300, TRRAP, KAT2A, ZBTB17 (MIZ-1), BIN1, HIF1A (PPI 0.99+) — MYC's coactivator/cofactor apparatus. Of these, only HIF1A is in Mosaic's curated target set; it carries 0 patents and 0 compounds *in Mosaic's KG*, against 73 tracked papers — a statement about this KG's patent coverage for HIF1A, not about the real-world landscape, where the HIF pathway is actively pursued. EP300, TRRAP, KAT2A, ZBTB17 and BIN1 are outside curated coverage, so their patent/compound status is not assessed (not a whitespace claim). This hints at the 'drug the machinery, not MYC itself' strategy, but it is PPI-proxy, not co-essentiality, so it is not advanced.
confidence: PPI-proxy — weakkg_native.synthetic_lethal_whitespace (PPI-proxy)
Patent / compound status: not assessed (out of coverage). gene outside Mosaic curated coverage (HIF1A excepted — in-set, 0 in this KG, which is a coverage statement not a landscape claim) — competitive landscape is a validated lead to verify externally, not a whitespace claim.
Resistance/partner co-mentions are thin and consensus. MCL1 (2 papers; 156 patents), CHEK2/BRAF/KRAS (1 paper each) — co-mentions, heavily patented, not whitespace.
confidence: body/mentionkg_native.resistance_bypass_map (curated)
Honest empties
- No co-essentiality fired.
- Modality uninformative.
- The emerging_signals patent surge is reported as a bear-side momentum caution, not a non-consensus finding.
What would change this thesis
- If any MYC-directed compound reaches phase 1, the central bear (structural undruggability) cracks and the validation finally has a chemistry on-ramp.
- If DepMap co-essentiality resolves a synthetic-lethal partner of MYC, the 'drug the machinery' angle upgrades from PPI-proxy to validated.
- If a tumor-selective MYC-dependency context is evidenced, the pan-essentiality/window bear weakens.